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AWS HealthOmics

Generate, run, debug lifescience workflows.

Version:
latest
Publisher:
awslabs

Install

Generated from the server’s transport data — never hand-written. Placeholders in angle brackets are yours to fill.

oci · mcp/aws-healthomics-mcp-server@sha256:ec0cd4776cbe1303816aaeaf8a8cbca57fbbe4805dff19a8898ba711275d1410 · version latest

claude mcp add aws-healthomics-mcp-server -e 'AWS_REGION=<AWS_REGION>' -e 'AWS_PROFILE=<AWS_PROFILE>' -- docker run -i --rm mcp/aws-healthomics-mcp-server

What it can do

As declared by the publisher

Tools · 73

  • ActivateAHOReadSets
  • AnalyzeAHORunPerformance
  • CancelAHORunBatch
  • CheckContainerAvailability
  • CloneContainerToECR
  • CreateAHOConfiguration
  • CreateAHORunCache
  • CreateAHORunGroup
  • CreateAHOSequenceStore
  • CreateAHOWorkflow
  • CreateAHOWorkflowVersion
  • CreateCodeConnection
  • CreateContainerRegistryMap
  • CreatePullThroughCacheForHealthOmics
  • DeleteAHOBatch
  • DeleteAHOConfiguration
  • DeleteAHORunBatch
  • DiagnoseAHORunFailure
  • GenerateAHORunTimeline
  • GetAHOBatch
  • GetAHOConfiguration
  • GetAHOReadSetExportJob
  • GetAHOReadSetImportJob
  • GetAHOReadSetMetadata
  • GetAHOReferenceImportJob
  • GetAHOReferenceMetadata
  • GetAHOReferenceStore
  • GetAHORun
  • GetAHORunCache
  • GetAHORunEngineLogs
  • GetAHORunGroup
  • GetAHORunLogs
  • GetAHORunManifestLogs
  • GetAHORunTask
  • GetAHOSequenceStore
  • GetAHOSupportedRegions
  • GetAHOTaskLogs
  • GetAHOWorkflow
  • GetCodeConnection
  • GetSupportedFileTypes
  • GrantHealthOmicsRepositoryAccess
  • LintAHOWorkflowBundle
  • LintAHOWorkflowDefinition
  • ListAHOBatches
  • ListAHOConfigurations
  • ListAHOReadSetExportJobs
  • ListAHOReadSetImportJobs
  • ListAHOReadSets
  • ListAHOReferenceImportJobs
  • ListAHOReferences
  • ListAHOReferenceStores
  • ListAHORunCaches
  • ListAHORunGroups
  • ListAHORuns
  • ListAHORunsInBatch
  • ListAHORunTasks
  • ListAHOSequenceStores
  • ListAHOWorkflows
  • ListAHOWorkflowVersions
  • ListCodeConnections
  • ListECRRepositories
  • ListPullThroughCacheRules
  • PackageAHOWorkflow
  • SearchGenomicsFiles
  • StartAHOReadSetExportJob
  • StartAHOReadSetImportJob
  • StartAHOReferenceImportJob
  • StartAHORun
  • StartAHORunBatch
  • UpdateAHORunCache
  • UpdateAHORunGroup
  • UpdateAHOSequenceStore
  • ValidateHealthOmicsECRConfig
AWS HealthOmics MCP server — setup for Claude Code, Cursor and VS Code · connect0